Generate cohort observation period — generateCohortObservationPeriod • PlasmodeSimulation

Generates new cohort observation periods for the patients in the exposure cohorts. At the moment, the new observation period is created by limiting the actual observation period at the end of the exposure for each patient.

Usage

generateCohortObservationPeriod(
  connectionDetails,
  cdmDatabaseSchema,
  exposureDatabaseSchema,
  exposureTable,
  resultDatabaseSchema,
  resultTable = "cohort_observation_period",
  maxObservationPeriod,
  washoutPeriod
)

Arguments

connectionDetails: The connection details to the database. Should be an object of type createConnectionDetails.
cdmDatabaseSchema: The database schema where the cdm database is stored.
exposureDatabaseSchema: The database schema where table with the exposure cohorts are stored.
exposureTable: The table where the exposure cohorts are stored.
resultDatabaseSchema: The database schema where the table with the new observation periods will be stored. Needs write permission.
resultTable: The table with the new obsrevation periods.
maxObservationPeriod: The maximum length of the observation period.
washoutPeriod: The minimum number of days before exposure.